STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5M60740S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (144 aa)    
Predicted Functional Partners:
A0A4U5Q6M3
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.999
A0A4U5LSK7
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.998
A0A4U5MHZ8
Uncharacterized protein.
   
 0.998
A0A4U5MBB5
40S ribosomal protein S28.
  
 0.997
A0A4U5MYU9
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.997
A0A4U5PL80
40S ribosomal protein S11 isoform X1; Belongs to the universal ribosomal protein uS17 family.
  
 0.997
A0A4U5PLK2
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.997
A0A4U5QQE0
Putative 40S ribosomal protein s12; Belongs to the universal ribosomal protein uS12 family.
  
 0.997
A0A4U5QZ97
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.997
A0A4U5R1R9
40S ribosomal protein S28.
  
 0.997
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.