STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MA57Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (599 aa)    
Predicted Functional Partners:
A0A4U5QEZ4
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.863
A0A4U5NR14
Uncharacterized protein.
   
 0.862
A0A4V6XX27
DNA repair protein XRCC3-like.
    
 0.843
A0A4V6A9Y0
Crossover junction endonuclease MUS81 isoform X2.
   
 0.779
A0A4U5NLH1
Rad51 domain-containing protein.
   
 0.770
A0A4U5Q129
Meiotic recombination protein DMC1; Belongs to the RecA family.
   
 0.770
A0A4U5QC09
DNA repair-recombination family protein.
  
 0.770
A0A4U5QZV8
DNA repair protein RAD51-like 3 isoform X1.
   
 0.770
A0A4U5QEI6
Exonuclease 1.
  
 0.762
A0A4U5QKM3
Exonuclease 1.
  
 0.762
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.