STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MBD8Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (569 aa)    
Predicted Functional Partners:
A0A4U5NKJ1
Protein GLE1 isoform X3.
    
 0.588
A0A4U5NR60
ASF1-like anti-silencing family protein.
    
 0.580
A0A4U5QC15
Histone chaperone ASF1B-like.
    
 0.580
A0A4V6A792
Uncharacterized protein.
    
  0.572
A0A4U5QB33
Nuclear-pore anchor.
    
 0.553
A0A4U5N7Z6
Seh1 family protein; Belongs to the WD repeat SEC13 family.
    
  0.546
A0A4U5QS66
Nuclear pore complex protein NUP35.
    
  0.537
A0A4U5NL19
Uncharacterized protein.
    
  0.529
A0A4U5MWV0
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
 
 0.518
A0A4U5QEP4
Peroxidase 7; Belongs to the peroxidase family.
   
 
 0.518
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.