STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MBF4Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
A0A4U5MX14
Outer membrane OMP85 family protein.
    
 
 0.520
A0A4U5QCL9
Outer membrane OMP85 family protein.
    
 
 0.520
A0A4U5Q4F3
RanBP2-type domain-containing protein.
      
 0.489
A0A4U5Q9B8
Transcription initiation factor TFIID subunit 15-like.
      
 0.487
A0A4U5NBH6
Uncharacterized protein.
      
 0.435
A0A4U5QDT4
Uncharacterized protein.
      
 0.435
A0A4U5N804
Mitochondrial import receptor subunit TOM40-1-like.
   
 
 0.433
A0A4U5QLM8
Porin family protein.
   
 
 0.433
A0A4U5LSN5
Chloroplast outer membrane family protein.
    
 
 0.432
A0A4U5QFP4
Outer envelope protein 80, chloroplastic-like isoform X2.
    
 
 0.432
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.