STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MBJ6Terpene synthase/cyclase family protein. (558 aa)    
Predicted Functional Partners:
A0A4U5P3Z9
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.825
A0A4U5QLR3
(-)-germacrene D synthase-like.
  
  
 
0.724
A0A4U5NN27
Squalene synthase-like.
     
 0.657
A0A4U5Q9I7
Squalene synthase isoform X1.
     
 0.657
A0A4U5PSV3
Putative GGPPsynthase family protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.648
A0A4U5PY44
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.648
A0A4U5QUP7
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.648
A0A4V6A998
Geranylgeranyl pyrophosphate synthase family protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.648
A0A4U5P3J6
Uncharacterized protein.
   
 
 0.637
A0A4U5PN41
Farnesyl-pyrophosphate synthetase fps2 family protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.637
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.