STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MBN6EARS family protein. (300 aa)    
Predicted Functional Partners:
A0A4U5NAU6
VQ motif-containing family protein.
  
     0.535
A0A4U5Q3G6
Transcription factor TCP13-like.
  
   
 0.531
A0A4U5MXR7
VQ domain-containing protein.
  
     0.530
A0A4V6AAC8
TCP domain-containing protein.
  
   
 0.527
A0A4U5QNX7
VQ domain-containing protein.
  
     0.524
A0A4U5R001
VQ motif-containing family protein.
  
     0.518
A0A4U5P6M8
POX domain-containing protein.
  
     0.516
A0A4U5PR48
Transcription factor bHLH112-like isoform X1.
  
     0.499
A0A4U5PSU7
GUB_WAK_bind domain-containing protein.
  
     0.491
A0A4U5QU06
Uncharacterized protein.
  
     0.488
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.