STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MBR1Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like isoform X1. (484 aa)    
Predicted Functional Partners:
A0A4U5NQE0
26S proteasome regulatory subunit 4-like A-like; Belongs to the AAA ATPase family.
   
 0.977
A0A4U5QT58
26S proteasome regulatory subunit 4-like A; Belongs to the AAA ATPase family.
   
 0.977
A0A4U5N7F9
26S proteasome non-ATPase regulatory subunit 12-like A-like.
   
 0.972
A0A4U5QNG0
26S proteasome regulatory subunit family protein.
   
 0.972
A0A4U5MHS5
26S proteasome non-ATPase regulatory subunit 6-like.
   
 0.970
A0A4U5P3U4
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
  
 0.970
A0A4U5Q7Y9
PCI domain-containing protein.
   
 0.970
A0A4V6A9J6
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
  
 0.970
A0A4U5MPL0
Nas2_N domain-containing protein.
    
 0.968
A0A4U5QG02
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
  
 0.968
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.