STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MBY7GCFC domain-containing protein. (971 aa)    
Predicted Functional Partners:
A0A4U5LT36
Pre-mRNA splicing factor ATP-dependent RNA helicase family protein.
    
 0.880
A0A4U5QTB7
Uncharacterized protein.
    
 0.880
A0A4U5QYM8
GCIP-interacting family protein.
    
  0.871
A0A4U5MPA9
Uncharacterized protein.
    
 0.833
A0A4U5P641
G-patch domain-containing protein.
    
 0.833
A0A4U5Q378
G patch domain-containing protein 8-like.
    
 0.833
A0A4U5QG25
Septin and tuftelin-interacting protein 1-like 1-like.
    
 0.833
A0A4V6A743
D111/G-patch domain-containing family protein.
    
 0.833
A0A4U5NS50
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.826
A0A4U5QQL9
WD_REPEATS_REGION domain-containing protein.
     
 0.714
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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