STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MCJ0Cationic amino acid transporter 6, chloroplastic-like. (585 aa)    
Predicted Functional Partners:
A0A4U5MYM8
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.543
A0A4U5QJJ7
Uncharacterized protein.
   
 0.543
A0A4U5QKW6
Uncharacterized protein.
   
 0.543
A0A4U5QUA8
Uncharacterized protein.
   
 0.543
A0A4U5QUH7
Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like.
   
 0.543
A0A4U5QXL6
Dehydroquinate dehydratase family protein.
   
 0.543
A0A4U5R1M3
Uncharacterized protein.
   
 0.543
A0A4U5R1T2
Uncharacterized protein.
   
 0.543
A0A4U5R3L3
Shikimate_dh_N domain-containing protein.
   
 0.543
A0A4V6A843
DHQ_synthase domain-containing protein.
   
 0.543
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.