STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MHT6Polysacc_synt_4 domain-containing protein. (198 aa)    
Predicted Functional Partners:
A0A4U5PST2
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.503
A0A4U5QWH7
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.499
A0A4U5N9J6
GPI-anchored protein.
  
     0.478
A0A4U5QKM6
OVATE domain-containing protein.
  
     0.476
A0A4U5QSU9
Transcription repressor OFP8-like.
  
     0.470
A0A4U5R2G8
Putative lysine-specific demethylase ELF6.
  
     0.470
A0A4U5NPN5
Uncharacterized protein.
  
     0.467
A0A4U5PTQ3
Circadian clock coupling factor family protein.
  
     0.467
A0A4U5R060
Uncharacterized protein.
  
     0.467
A0A4U5PZI6
Uncharacterized protein.
  
     0.458
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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