STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MN33Endoribonuclease Dicer-like 1; Belongs to the helicase family. Dicer subfamily. (2003 aa)    
Predicted Functional Partners:
A0A4U5PKE2
Uncharacterized protein.
   
 
 0.919
A0A4U5NSY9
Uncharacterized protein.
   
 
 0.909
A0A4U5Q7J2
39S ribosomal protein L46, mitochondrial.
   
 
 0.909
A0A4U5QLT4
L51_S25_CI-B8 domain-containing protein.
   
 
 0.891
A0A4U5PTF1
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.884
A0A4U5NAU0
Ribosomal protein L23.
   
 
 0.883
A0A4U5QYQ3
Uncharacterized protein.
   
 
 0.868
A0A4U5Q737
30S ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.
   
   0.858
A0A4U5QWI4
50S ribosomal protein L27, chloroplastic-like.
  
 
 0.829
A0A4V6A2R0
Uncharacterized protein.
  
 
 0.829
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.