STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MNP2Rab-GAP TBC domain-containing protein. (399 aa)    
Predicted Functional Partners:
A0A4U5QKG3
Protein NRDE2-like.
    
 0.947
A0A4U5N0N9
Septum-promoting GTP-binding protein 1 isoform X1.
   
 0.881
A0A4U5R668
Septum-promoting GTP-binding protein 1-like.
   
 0.881
A0A4U5R6Q2
Uncharacterized protein.
   
 0.881
A0A4U5QCX7
Uncharacterized protein.
    
 
 0.703
A0A4U5QE96
E3 ubiquitin-protein ligase KEG isoform X2.
    
 
 0.703
A0A4U5QJ23
Uncharacterized protein.
    
 
 0.703
A0A4U5QFN5
DUF667 domain-containing protein.
    
   0.664
A0A4U5M9E3
Uncharacterized protein.
    
 0.632
A0A4U5NND2
Ras-related protein Rab7.
    
 0.632
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.