STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MP08NAC-A/B domain-containing protein. (224 aa)    
Predicted Functional Partners:
A0A4U5P596
Elongation factor 1-gamma.
   
 
 0.976
A0A4U5LSK7
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
   0.944
A0A4U5MP59
Nascent polypeptide-associated complex subunit beta.
   
 
 0.924
A0A4U5PTI9
Nascent polypeptide-associated complex subunit beta.
   
 
 0.924
A0A4U5QXT0
Nascent polypeptide-associated complex subunit beta.
   
 
 0.924
A0A4U5R2I8
Nascent polypeptide-associated complex subunit beta.
   
 
 0.924
A0A4U5QKC2
60S ribosomal protein L10-like isoform X2.
  
   0.914
A0A4V6XVY2
60S ribosomal protein L10.
  
   0.914
A0A4U5MA00
Ribos_L4_asso_C domain-containing protein.
   
 
 0.878
A0A4U5QQ99
Ribos_L4_asso_C domain-containing protein.
   
 
 0.878
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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