STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MP53Calcium-dependent protein kinase. (598 aa)    
Predicted Functional Partners:
A0A4U5QQ70
Uncharacterized protein.
   
 
 0.888
A0A4U5QXK1
Respiratory burst oxidase-like protein B.
   
 
 0.888
A0A4U5PLY1
Uncharacterized protein.
   
 
 0.866
A0A4U5PVT7
NADPH oxidase family protein.
   
 
 0.866
A0A4U5MHJ8
Respiratory burst oxidase C family protein.
   
 
 0.833
A0A4U5PW60
Respiratory burst oxidase C family protein.
   
 
 0.833
A0A4U5QE38
Uncharacterized protein.
   
 
 0.833
A0A4V6A3U9
Uncharacterized protein.
   
 
 0.833
A0A4U5MNI6
Serine/threonine-protein phosphatase.
    
 0.658
A0A4U5QT24
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. BSU subfamily.
    
 0.658
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.