STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MP60Uncharacterized protein. (444 aa)    
Predicted Functional Partners:
A0A4U5NLE0
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.542
A0A4U5QSH3
LEA_2 domain-containing protein.
  
 
 0.537
A0A4U5M9T0
LEA_2 domain-containing protein.
  
 
 0.530
A0A4U5QEM4
Nodulation-signaling pathway 2 protein-like; Belongs to the GRAS family.
  
   
 0.528
A0A4U5PTV6
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.527
A0A4U5QXQ5
LEA_2 domain-containing protein.
  
 
 0.523
A0A4U5NL00
Uncharacterized protein.
  
     0.518
A0A4U5QSL7
Scarecrow transcription factor family protein; Belongs to the GRAS family.
  
   
 0.518
A0A4U5Q0C3
Protein SCARECROW-like; Belongs to the GRAS family.
  
     0.517
A0A4U5QHZ2
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.517
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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