STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MP61Pentatricopeptide repeat-containing family protein. (1048 aa)    
Predicted Functional Partners:
A0A4U5Q2Z7
Uncharacterized protein.
  
     0.525
A0A4V6A7U8
Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic.
  
 
   0.523
A0A4U5QJT2
G-type lectin S-receptor-like serine/threonine-protein kinase.
  
   0.512
A0A4U5QST4
G-type lectin S-receptor-like serine/threonine-protein kinase.
  
   0.505
A0A4U5NQY0
Uncharacterized protein.
  
     0.504
A0A4U5QA90
Uncharacterized protein.
  
 
   0.499
A0A4U5P5I0
Mediator-associated protein 1-like.
  
 
   0.497
A0A4U5MAU3
Uncharacterized protein.
  
     0.495
A0A4U5PTR6
Uncharacterized protein.
  
     0.495
A0A4U5PY06
Uncharacterized protein.
  
     0.495
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.