Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A4U5MP79Ubiquitin fusion degradation protein 1-like. (123 aa)    
Predicted Functional Partners:
A0A4U5MQ34
NPL4-like protein 1.
   
 0.936
A0A4U5QU11
MPN domain-containing protein.
   
 0.936
A0A4U5M526
UBX domain-containing protein.
   
 0.923
A0A4U5NM15
UBX domain-containing protein.
   
 0.923
A0A4U5M9Z6
Cell division cycle protein 48-like.
   
 0.884
A0A4U5MHS1
Uncharacterized protein.
   
 0.884
A0A4U5MY10
ATPase_AAA_core domain-containing protein.
   
 0.884
A0A4U5MZJ5
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.884
A0A4U5PST1
Uncharacterized protein.
   
 0.884
A0A4U5Q9A5
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.884
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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