STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5MWE5Uncharacterized protein; Belongs to the peptidase C1 family. (342 aa)    
Predicted Functional Partners:
A0A4U5MHS2
UPF0235 protein.
    
  0.863
A0A4U5Q963
Uncharacterized protein.
    
  0.863
A0A4U5QQX8
Saposin B domain-containing family protein.
   
 
 0.582
A0A4U5QCR5
SERPIN domain-containing protein; Belongs to the serpin family.
    
 0.543
A0A4U5QXU8
Serpin family protein; Belongs to the serpin family.
    
 0.543
A0A4U5M4R2
Transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
  0.505
A0A4U5NL61
Protein transport protein SEC13-like B; Belongs to the WD repeat SEC13 family.
    
  0.505
A0A4U5P5I5
Transducin family protein.
     
 0.499
A0A4V5ZXA5
Protein transport protein SEC31-like B-like.
     
 0.499
A0A4V6AA82
Pept_C1 domain-containing protein.
  
0.441
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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