STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5N9Z4PHD finger family protein. (341 aa)    
Predicted Functional Partners:
A0A4U5PZ45
Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM.
    
 0.799
A0A4V6A7Q4
Uncharacterized protein.
     
 0.782
A0A4U5NAJ1
Histone domain-containing protein.
   
 0.727
A0A4U5NAP8
Histone H3; Belongs to the histone H3 family.
   
 0.727
A0A4U5Q626
Uncharacterized protein.
   
 
 0.695
A0A4U5PV34
Histone-lysine N-methyltransferase ASHH2.
   
 
0.694
A0A4U5R5A2
Uncharacterized protein.
   
 
 0.694
A0A4U5N9V0
Chromatin modification-related protein EAF3-like isoform X1.
   
 
 0.693
A0A4U5QVP4
Mortality factor 4-like protein 1 isoform X1.
   
 
 0.693
A0A4U5MAI6
Uncharacterized protein.
   
 0.674
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.