STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5NA56BTB domain-containing protein. (561 aa)    
Predicted Functional Partners:
A0A4U5NB35
E3 ubiquitin-protein ligase PRT1-like isoform X1.
    
 0.782
A0A4U5QHY6
Uncharacterized protein.
    
 0.782
A0A4U5QML9
Uncharacterized protein.
    
 0.782
A0A4U5MHZ7
Uncharacterized protein.
    
 0.771
A0A4U5QDI3
Uncharacterized protein.
    
 0.771
A0A4U5N8M8
Uncharacterized protein.
    
 0.715
A0A4U5MPT6
Ankyrin repeat family protein.
    
 0.701
A0A4U5Q0E4
ANK_REP_REGION domain-containing protein.
    
 0.701
A0A4U5QKP4
Ankyrin-1.
    
 0.701
A0A4U5P7C1
Ring box family protein.
    
 0.681
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
Server load: high (84%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.