STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5NAS2Uncharacterized protein. (375 aa)    
Predicted Functional Partners:
A0A4U5MHZ7
Uncharacterized protein.
   
 0.973
A0A4U5NKX6
DNA repair protein complementing XP-C cells-like isoform X1.
   
 0.973
A0A4U5QDI3
Uncharacterized protein.
   
 0.973
A0A4U5MPU4
TGc domain-containing protein.
    
 0.972
A0A4U5LZW2
UBIQUITIN EXTENSION protein 1.
   
 0.928
A0A4U5NQG4
Ubiquitin-like.
   
 0.928
A0A4U5Q6M3
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.894
A0A4U5NQE0
26S proteasome regulatory subunit 4-like A-like; Belongs to the AAA ATPase family.
   
 0.874
A0A4U5QT58
26S proteasome regulatory subunit 4-like A; Belongs to the AAA ATPase family.
   
 0.874
A0A4U5NB35
E3 ubiquitin-protein ligase PRT1-like isoform X1.
   
 0.870
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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