STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5NKF2Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (357 aa)    
Predicted Functional Partners:
A0A4U5Q5A0
50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family.
  
 0.998
A0A4U5PKE2
Uncharacterized protein.
   
 
 0.996
A0A4U5PTF1
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.996
A0A4U5NSY9
Uncharacterized protein.
  
 
 0.995
A0A4U5Q7J2
39S ribosomal protein L46, mitochondrial.
   
   0.995
A0A4U5PXU9
50S ribosomal protein L24, chloroplastic; Belongs to the universal ribosomal protein uL24 family.
  
 0.994
A0A4U5Q3P8
Ribosomal protein S12.
  
 
 0.994
A0A4U5PZT3
60S ribosomal protein L2, mitochondrial.
  
 0.993
A0A4U5Q954
Ribosomal_L2_C domain-containing protein.
  
 0.993
A0A4U5LSG1
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.992
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
Server load: low (14%) [HD]