Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A4U5MI13 | A0A4U5MI68 | Ipi1_N domain-containing protein. | CLP1_P domain-containing protein. | 0.967 |
A0A4U5MI13 | A0A4U5NA89 | Ipi1_N domain-containing protein. | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | 0.938 |
A0A4U5MI13 | A0A4U5NMH9 | Ipi1_N domain-containing protein. | Hydroxyproline-rich glycoprotein. | 0.471 |
A0A4U5MI13 | A0A4U5NSN2 | Ipi1_N domain-containing protein. | Uncharacterized protein. | 0.938 |
A0A4U5MI13 | A0A4U5Q4T6 | Ipi1_N domain-containing protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.913 |
A0A4U5MI13 | A0A4U5QCU0 | Ipi1_N domain-containing protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.909 |
A0A4U5MI68 | A0A4U5MI13 | CLP1_P domain-containing protein. | Ipi1_N domain-containing protein. | 0.967 |
A0A4U5MI68 | A0A4U5NA89 | CLP1_P domain-containing protein. | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | 0.944 |
A0A4U5MI68 | A0A4U5NMH9 | CLP1_P domain-containing protein. | Hydroxyproline-rich glycoprotein. | 0.446 |
A0A4U5MI68 | A0A4U5NP25 | CLP1_P domain-containing protein. | Ipi1_N domain-containing protein. | 0.967 |
A0A4U5MI68 | A0A4U5NSN2 | CLP1_P domain-containing protein. | Uncharacterized protein. | 0.944 |
A0A4U5MI68 | A0A4U5Q4T6 | CLP1_P domain-containing protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.985 |
A0A4U5MI68 | A0A4U5QCU0 | CLP1_P domain-containing protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.973 |
A0A4U5NA89 | A0A4U5MI13 | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | Ipi1_N domain-containing protein. | 0.938 |
A0A4U5NA89 | A0A4U5MI68 | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | CLP1_P domain-containing protein. | 0.944 |
A0A4U5NA89 | A0A4U5NMH9 | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | Hydroxyproline-rich glycoprotein. | 0.400 |
A0A4U5NA89 | A0A4U5NP25 | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | Ipi1_N domain-containing protein. | 0.938 |
A0A4U5NA89 | A0A4U5Q4T6 | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.961 |
A0A4U5NA89 | A0A4U5QCU0 | Protein ROOT INITIATION DEFECTIVE 3 isoform X1. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.927 |
A0A4U5NJU7 | A0A4U5NMH9 | Nudix hydrolase 17, mitochondrial-like. | Hydroxyproline-rich glycoprotein. | 0.400 |
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