STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5NPZ2CCR4-NOT transcription complex family protein. (277 aa)    
Predicted Functional Partners:
A0A4U5QUK3
Uncharacterized protein.
   
 0.872
A0A4V6A1H2
CCR4-NOT transcription complex subunit 1-like.
   
 0.872
A0A4U5M9I1
NOT2_3_5 domain-containing protein.
   
 0.866
A0A4V6A5L3
NOT2_3_5 domain-containing protein.
   
 0.866
A0A4U5P5N1
General negative regulator of transcription subunit 3 isoform X1.
    
 0.856
A0A4U5QD65
Uncharacterized protein.
    
 0.856
A0A4U5PNB4
CCR4-NOT transcription complex subunit 10-like.
    
 0.808
A0A4U5QM74
CCR4-NOT transcription complex subunit 10-like.
    
 0.808
A0A4U5NKV8
Uncharacterized protein.
    
 0.762
A0A4U5NR46
Uncharacterized protein.
    
 0.762
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.