STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5NPZ9RING-type domain-containing protein. (458 aa)    
Predicted Functional Partners:
A0A4U5QQV6
Transducin family protein.
    
   0.525
A0A4U5QYQ4
Regulatory-associated protein of TOR 1-like isoform X1.
    
   0.525
A0A4U5QJ28
Uncharacterized protein.
  
     0.519
A0A4U5MWW5
Uncharacterized protein.
  
     0.514
A0A4U5R569
Uncharacterized protein.
  
     0.512
A0A4U5QC73
Uncharacterized protein.
  
     0.511
A0A4U5Q0G1
Uncharacterized protein.
  
     0.508
A0A4U5PV16
Cell number regulator 6-like.
  
     0.503
A0A4V6A5Q2
Uncharacterized protein.
  
     0.502
A0A4U5QJI7
Uncharacterized protein.
      
 0.495
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.