STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5P359Uncharacterized protein. (401 aa)    
Predicted Functional Partners:
A0A4U5N6Z5
Uncharacterized protein.
   
 
 0.940
A0A4U5Q737
30S ribosomal protein S18; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.938
A0A4U5Q7J2
39S ribosomal protein L46, mitochondrial.
   
 
 0.922
A0A4U5QGD4
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.914
A0A4U5QLT4
L51_S25_CI-B8 domain-containing protein.
   
   0.906
A0A4U5NSY9
Uncharacterized protein.
  
 
 0.897
A0A4U5NAU0
Ribosomal protein L23.
   
 
 0.895
A0A4U5Q3P8
Ribosomal protein S12.
   
 
 0.895
A0A4U5PKE2
Uncharacterized protein.
   
 
 0.873
A0A4U5P796
Zinc finger CCCH domain-containing protein 49-like.
     
 0.871
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.