STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5P3R6Ataxin-3-like. (280 aa)    
Predicted Functional Partners:
A0A4U5QCZ5
Autophagy protein Apg6.
    
 0.940
A0A4U5P7R9
LsmAD domain-containing protein.
    
 0.933
A0A4U5LZW2
UBIQUITIN EXTENSION protein 1.
    
  0.872
A0A4U5NQG4
Ubiquitin-like.
    
  0.872
A0A4U5MYA3
Ubiquitin-40S ribosomal protein S27a.
    
 0.846
A0A4U5Q2M1
Ubiquitin-40S ribosomal protein S27a-like.
    
 0.846
A0A4U5QAI9
Ubiquitin-like domain-containing protein.
    
 0.846
A0A4U5QTD5
Ubiquitin/ribosomal protein 27a.
    
 0.846
A0A4U5M9Z6
Cell division cycle protein 48-like.
   
 0.827
A0A4U5MHS1
Uncharacterized protein.
   
 0.827
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.