STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5P5A5Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
A0A4U5QMN7
60S ribosomal protein L13a-4-like; Belongs to the universal ribosomal protein uL13 family.
   
   0.537
A0A4U5MP71
Uncharacterized protein.
   
   0.497
A0A4U5NKQ5
60S ribosomal protein L21-1-like.
   
   0.497
A0A4U5QDI5
60S ribosomal protein L21.
   
   0.497
A0A4V6A822
60S ribosomal protein L21.
   
   0.497
A0A4U5PZV0
Cellulose synthase.
  
 
  0.493
A0A4U5PZT4
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
  
 
  0.459
A0A4U5QQ63
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.451
A0A4U5QGN4
LOB domain-containing protein 39-like.
  
     0.440
A0A4U5LSI3
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.435
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.