STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5PLG1Methyl-CpG-binding domain-containing protein 2-like isoform X4. (337 aa)    
Predicted Functional Partners:
A0A4U5MWZ9
Protein CHROMATIN REMODELING 4-like isoform X2.
    
 0.718
A0A4U5P4L7
Protein CHROMATIN REMODELING 4-like isoform X2.
    
 0.718
A0A4U5PVT8
Chromodomain-helicase-DNA-binding family protein.
    
 0.718
A0A4U5QK80
CHD3-type chromatin-remodeling factor PICKLE isoform X1.
    
 0.718
A0A4U5QNH4
GYMNOS family protein.
    
 0.718
A0A4U5MBB9
WD_REPEATS_REGION domain-containing protein.
    
 0.710
A0A4U5MNL8
WD_REPEATS_REGION domain-containing protein.
    
 0.710
A0A4U5Q6S8
WD_REPEATS_REGION domain-containing protein.
    
 0.710
A0A4U5QIK6
WD-40 repeat-containing protein MSI4-like.
    
 0.710
A0A4U5QWS5
WD-40 repeat-containing protein MSI4-like.
    
 0.710
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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