STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5PWV1Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
A0A4U5R348
Chalcone_isomerase domain-containing protein.
      
 0.503
A0A4U5PSM5
Chalcone_isomerase domain-containing protein.
      
 0.472
A0A4V5ZZ23
Chalcone_isomerase domain-containing protein.
      
 0.472
A0A4U5NQ19
Shugoshin_C domain-containing protein.
  
     0.447
A0A4U5NMF5
Uncharacterized protein.
  
     0.439
A0A4V6ACL6
Uncharacterized protein.
  
     0.438
A0A4U5P6X6
Shugoshin-1 isoform X1.
  
     0.426
A0A4U5NR49
Peptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer.
      
 0.408
A0A4U5QR12
FBA_1 domain-containing protein.
  
     0.406
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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