STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5Q192Basic helix-loop-helix family protein. (694 aa)    
Predicted Functional Partners:
A0A4U5QUR7
Uncharacterized protein.
  
 
  0.552
A0A4U5NLZ3
Uncharacterized protein.
  
 
  0.549
A0A4U5M4W5
Uncharacterized protein.
  
     0.500
A0A4U5QN12
Uncharacterized protein.
  
 
   0.496
A0A4U5PTN4
Uncharacterized protein.
  
     0.493
A0A4U5NLB4
Uncharacterized protein.
  
     0.492
A0A4U5QEA4
Uncharacterized protein.
  
     0.483
A0A4U5MA07
Uncharacterized protein.
  
     0.480
A0A4U5P3Y2
Uncharacterized protein.
  
 
  0.480
A0A4U5PKL3
Uncharacterized protein.
  
     0.478
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.