STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5QBW22-hydroxyacyl-CoA lyase; Belongs to the TPP enzyme family. (577 aa)    
Predicted Functional Partners:
A0A4U5MYR3
Acetolactate synthase small subunit 1, chloroplastic-like isoform X1.
  
 0.995
A0A4U5QB53
Uncharacterized protein.
  
 0.995
A0A4V6A8Z0
Uncharacterized protein.
  
 0.995
A0A4U5PRN7
Peroxisome biogenesis factor 10 isoform X2; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.973
A0A4U5R045
Aminotran_5 domain-containing protein.
  
 
 0.942
A0A4U5QBZ7
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.941
A0A4U5M9I2
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
  
 0.940
A0A4U5NAY1
Dehydratase family protein.
  
 
 0.912
A0A4U5QE08
Dihydroxy-acid dehydratase, chloroplastic-like.
  
 
 0.912
A0A4V6A3W2
Peroxisomal targeting signal-1 receptor family protein.
    
 0.903
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.