STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5QNX2TPR_REGION domain-containing protein. (600 aa)    
Predicted Functional Partners:
A0A4U5PWV4
RNA polymerase-associated protein LEO1.
    
 0.800
A0A4U5QBM9
E3 ubiquitin ligase family protein.
    
 0.793
A0A4U5LQF1
Anaphase-promoting complex subunit 4.
    
 0.792
A0A4U5PTK5
ANAPC5 domain-containing protein.
   
 0.792
A0A4U5QXA5
Chromatin structure-remodeling complex protein SYD-like isoform X2.
    
 0.750
A0A4V6A8S1
Chromatin structure-remodeling complex protein SYD-like isoform X2.
    
 0.750
A0A4V6A9N4
Uncharacterized protein.
    
 0.749
A0A4U5NLV8
Parafibromin-like.
    
 0.726
A0A4U5Q537
Parafibromin-like.
    
 0.726
A0A4V6ABF4
Integrator complex subunit 9-like isoform X2.
    
 0.723
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.