STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5QP06AP2/ERF domain-containing protein. (288 aa)    
Predicted Functional Partners:
A0A4U5QZI6
Dof-type domain-containing protein.
  
     0.480
A0A4U5PVQ2
Dof-type domain-containing protein.
  
     0.467
A0A4U5QCK6
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
 
   0.462
A0A4U5QVE4
PHD finger family protein.
  
     0.460
A0A4U5R2W1
Photosystem II oxygen-evolving complex protein 2.
  
   
 0.452
A0A4U5Q4R2
Photosystem II oxygen-evolving complex protein 2.
  
   
 0.450
A0A4U5R1N0
Photosystem I 11K family protein.
  
     0.441
A0A4U5PSG3
Uncharacterized protein.
  
     0.421
A0A4U5NBC7
Mitochondrial import receptor subunit TOM20.
  
     0.418
A0A4U5QUY7
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
 
   0.416
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.