STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5QQA0Zinc finger family protein. (359 aa)    
Predicted Functional Partners:
A0A4U5MW13
Developmentally-regulated G-protein 3.
   
 
 0.981
A0A4U5P7A9
Developmentally regulated GTP binding family protein.
   
 
 0.959
A0A4U5QXD8
Developmentally-regulated G-protein 2.
   
 
 0.959
A0A4U5Q6M3
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
   0.850
A0A4U5MYZ6
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
   0.725
A0A4U5R1W5
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
   0.725
A0A4U5LSK7
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
   0.720
A0A4U5MNX4
40S ribosomal protein S15.
   
   0.708
A0A4U5Q0H7
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.708
A0A4U5Q153
Ribosomal S15 family protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.708
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.