STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5R0122-oxoglutarate dehydrogenase E1 component family protein. (1021 aa)    
Predicted Functional Partners:
A0A4U5P6Y4
annotation not available
 
 0.999
A0A4U5R3V5
Lipoyl-binding domain-containing protein.
 
 0.999
A0A4U5Q9D9
2-oxoacid dehydrogenase family protein.
 
 0.991
A0A4U5P2T4
FAD_binding_2 domain-containing protein.
  
 0.978
A0A4U5P320
Uncharacterized protein.
  
 0.978
A0A4U5PZJ9
Uncharacterized protein.
  
 0.978
A0A4V6ABH8
Dihydrolipoyl dehydrogenase 2, chloroplastic.
  
 0.978
A0A4U5QBZ7
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.975
A0A4U5P2T6
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
 0.961
A0A4U5PRL0
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
 0.961
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.