STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5R0Q1Fn3_like domain-containing protein. (802 aa)    
Predicted Functional Partners:
A0A4U5R4V2
Uncharacterized protein.
     
 0.659
A0A4U5QCU0
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
 
 
 0.521
A0A4U5MI13
Ipi1_N domain-containing protein.
    
 0.471
A0A4U5NP25
Ipi1_N domain-containing protein.
    
 0.471
A0A4U5MI68
CLP1_P domain-containing protein.
   
  0.451
A0A4V6A2L7
Glyco_hydro_3 domain-containing protein.
  
  
 
0.411
A0A4U5Q4T6
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.403
A0A4U5NA89
Protein ROOT INITIATION DEFECTIVE 3 isoform X1.
   
  0.400
A0A4U5NSN2
Uncharacterized protein.
   
  0.400
A0A4U5PWM7
WD_REPEATS_REGION domain-containing protein.
   
  0.400
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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