STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5R3U3Ubiquitin-conjugating enzyme E2 7 family protein; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)    
Predicted Functional Partners:
A0A4U5LZW2
UBIQUITIN EXTENSION protein 1.
   
 0.959
A0A4U5NQG4
Ubiquitin-like.
   
 0.959
A0A4U5PWC1
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.937
A0A4U5Q1A4
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.937
A0A4U5QD29
Ubiquitin-activating enzyme E1 1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.937
A0A4U5MYA3
Ubiquitin-40S ribosomal protein S27a.
    
 0.889
A0A4U5Q2M1
Ubiquitin-40S ribosomal protein S27a-like.
    
 0.889
A0A4U5QAI9
Ubiquitin-like domain-containing protein.
    
 0.889
A0A4U5QTD5
Ubiquitin/ribosomal protein 27a.
    
 0.889
A0A4U5QZZ4
Ubiquitin-conjugating enzyme E2 13 family protein; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.880
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.