STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5R4N8Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
A0A4U5QMK8
Pantoate--beta-alanine ligase family protein.
     
 0.937
A0A4U5PT33
DNA/panthothenate metabolism flavoprotein.
   
 
 0.892
A0A4U5Q8D1
Flavoprotein domain-containing protein.
   
 
 0.892
A0A4U5QSG3
DNA/panthothenate metabolism flavoprotein.
   
 
 0.892
A0A4U5QAJ7
Cytidine deaminase 1 family protein.
    
  0.873
A0A4U5QRC1
Cytidine deaminase 1 family protein.
    
  0.873
A0A4U5Q9P9
SnoaL-like domain-containing protein.
    
  0.862
A0A4U5QWK5
Uncharacterized protein.
    
  0.862
A0A4U5PQF0
Vesicle transport protein GOT1B-like.
    
  0.833
A0A4U5QEB8
Got1-like family protein.
    
  0.833
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.