STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V6A3L9Cyclin-T1-4-like; Belongs to the cyclin family. (372 aa)    
Predicted Functional Partners:
A0A4U5QS32
CAK associated cyclinH-like; Belongs to the cyclin family.
     
 0.782
A0A4U5MBS0
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.762
A0A4U5R0V3
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.762
A0A4U5PQ56
Uncharacterized protein.
  
 
 0.758
A0A4U5M564
Cell division protein kinase; Belongs to the protein kinase superfamily.
     
 0.729
A0A4U5QU37
Cell division protein kinase; Belongs to the protein kinase superfamily.
     
 0.729
A0A4U5Q4S7
DNA-directed RNA polymerase II 36 kDa polypeptide B family protein.
   
 
 0.720
A0A4U5Q4K9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.714
A0A4U5QKH5
Ssu72-like family protein.
   
 
 0.711
A0A4U5P7A6
MIF4G domain-containing protein.
   
 0.697
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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