STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V6A8K6Lamin-like protein. (225 aa)    
Predicted Functional Partners:
A0A4U5N857
Lipase class 3 family protein.
  
     0.509
A0A4U5QR30
ACT domain-containing protein.
  
     0.505
A0A4U5PMG6
GDSL esterase/lipase.
  
     0.501
A0A4U5R2L8
ACT domain-containing protein.
  
     0.499
A0A4U5P660
PMEI domain-containing protein.
  
     0.494
A0A4U5PUL9
PMEI domain-containing protein.
  
     0.493
A0A4U5QFB2
Uncharacterized protein.
  
     0.484
A0A4U5PUN7
Uncharacterized protein.
  
     0.482
A0A4U5PP68
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
     0.472
A0A4U5R0K3
HMA domain-containing protein.
  
     0.471
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.