STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V6A8Y6Shugoshin-1-like isoform X9. (373 aa)    
Predicted Functional Partners:
A0A4U5PUW9
Uncharacterized protein.
    
  0.888
A0A4U5QSR8
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.888
A0A4U5QJD1
Uncharacterized protein.
    
 0.758
A0A4U5PZW9
Uncharacterized protein.
    
 0.652
A0A4U5QC83
Uncharacterized protein.
    
 0.652
A0A4U5R6C6
High mobility group family protein.
    
 0.652
A0A4V6AAZ4
Uncharacterized protein.
    
 0.652
A0A4U5PKE2
Uncharacterized protein.
    
  0.610
A0A4U5R0H7
General transcription factor 3C polypeptide 5-like isoform X2.
    
 0.602
A0A4U5QGD4
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
  0.596
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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