Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A4U5M4X7 | A0A4U5MQF1 | RNA-binding protein 25-like isoform X1. | CPSF_A domain-containing protein. | 0.809 |
A0A4U5M4X7 | A0A4U5QW01 | RNA-binding protein 25-like isoform X1. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.956 |
A0A4U5M4X7 | A0A4U5R3Y8 | RNA-binding protein 25-like isoform X1. | Splicing factor 3B subunit 3-like. | 0.809 |
A0A4U5M4X7 | A0A4U5R5M6 | RNA-binding protein 25-like isoform X1. | Splicing factor family protein. | 0.809 |
A0A4U5M4X7 | A0A4V6AA53 | RNA-binding protein 25-like isoform X1. | Uncharacterized protein. | 0.774 |
A0A4U5MPR3 | A0A4U5MQF1 | Cell division cycle 5-like protein. | CPSF_A domain-containing protein. | 0.943 |
A0A4U5MPR3 | A0A4U5R3Y8 | Cell division cycle 5-like protein. | Splicing factor 3B subunit 3-like. | 0.943 |
A0A4U5MPR3 | A0A4U5R5M6 | Cell division cycle 5-like protein. | Splicing factor family protein. | 0.943 |
A0A4U5MPR3 | A0A4V6AA53 | Cell division cycle 5-like protein. | Uncharacterized protein. | 0.748 |
A0A4U5MQF1 | A0A4U5M4X7 | CPSF_A domain-containing protein. | RNA-binding protein 25-like isoform X1. | 0.809 |
A0A4U5MQF1 | A0A4U5MPR3 | CPSF_A domain-containing protein. | Cell division cycle 5-like protein. | 0.943 |
A0A4U5MQF1 | A0A4U5NL98 | CPSF_A domain-containing protein. | Uncharacterized protein. | 0.809 |
A0A4U5MQF1 | A0A4U5QLF8 | CPSF_A domain-containing protein. | Uncharacterized protein. | 0.943 |
A0A4U5MQF1 | A0A4U5QW01 | CPSF_A domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.981 |
A0A4U5MQF1 | A0A4V6AA53 | CPSF_A domain-containing protein. | Uncharacterized protein. | 0.772 |
A0A4U5MYW1 | A0A4V6AA53 | E3 ubiquitin protein ligase. | Uncharacterized protein. | 0.762 |
A0A4U5NL98 | A0A4U5MQF1 | Uncharacterized protein. | CPSF_A domain-containing protein. | 0.809 |
A0A4U5NL98 | A0A4U5QW01 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.956 |
A0A4U5NL98 | A0A4U5R3Y8 | Uncharacterized protein. | Splicing factor 3B subunit 3-like. | 0.809 |
A0A4U5NL98 | A0A4U5R5M6 | Uncharacterized protein. | Splicing factor family protein. | 0.809 |
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