Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A4U5NQU5 | A0A4U5P4V7 | NAC domain-containing protein. | TOC159_MAD domain-containing protein. | 0.462 |
A0A4U5NQU5 | A0A4U5PS70 | NAC domain-containing protein. | Uncharacterized protein. | 0.539 |
A0A4U5NQU5 | A0A4U5Q0J6 | NAC domain-containing protein. | Uncharacterized protein. | 0.517 |
A0A4U5NQU5 | A0A4U5Q235 | NAC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.498 |
A0A4U5NQU5 | A0A4U5QF42 | NAC domain-containing protein. | Uncharacterized protein. | 0.535 |
A0A4U5NQU5 | A0A4U5QLH7 | NAC domain-containing protein. | Uncharacterized protein. | 0.519 |
A0A4U5NQU5 | A0A4U5R2L3 | NAC domain-containing protein. | Uncharacterized protein. | 0.520 |
A0A4U5NQU5 | A0A4U5R4T8 | NAC domain-containing protein. | Balbiani ring 1-related family protein. | 0.533 |
A0A4U5NQU5 | A0A4V6A9J3 | NAC domain-containing protein. | Uncharacterized protein. | 0.537 |
A0A4U5NQU5 | A0A4V6AA60 | NAC domain-containing protein. | GRAS domain-containing protein; Belongs to the GRAS family. | 0.504 |
A0A4U5P4V7 | A0A4U5NQU5 | TOC159_MAD domain-containing protein. | NAC domain-containing protein. | 0.462 |
A0A4U5P4V7 | A0A4U5PS70 | TOC159_MAD domain-containing protein. | Uncharacterized protein. | 0.456 |
A0A4U5P4V7 | A0A4U5Q0J6 | TOC159_MAD domain-containing protein. | Uncharacterized protein. | 0.466 |
A0A4U5P4V7 | A0A4U5Q235 | TOC159_MAD domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.464 |
A0A4U5P4V7 | A0A4U5QF42 | TOC159_MAD domain-containing protein. | Uncharacterized protein. | 0.588 |
A0A4U5P4V7 | A0A4U5QLH7 | TOC159_MAD domain-containing protein. | Uncharacterized protein. | 0.472 |
A0A4U5P4V7 | A0A4U5R2L3 | TOC159_MAD domain-containing protein. | Uncharacterized protein. | 0.476 |
A0A4U5P4V7 | A0A4U5R4T8 | TOC159_MAD domain-containing protein. | Balbiani ring 1-related family protein. | 0.484 |
A0A4U5P4V7 | A0A4V6A9J3 | TOC159_MAD domain-containing protein. | Uncharacterized protein. | 0.474 |
A0A4U5P4V7 | A0A4V6AA60 | TOC159_MAD domain-containing protein. | GRAS domain-containing protein; Belongs to the GRAS family. | 0.515 |
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