STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V6AAR7DNA mismatch repair protein MSH6-1. (310 aa)    
Predicted Functional Partners:
A0A4U5QAI2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 0.977
A0A4U5QDH0
DNA_mis_repair domain-containing protein.
  
 0.976
A0A4U5PSM8
Muts-like 2 family protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.974
A0A4U5QUL8
DNA mismatch repair family protein.
  
 0.968
A0A4U5P730
DNA mismatch repair protein MSH5 isoform X2.
   
 0.966
A0A4V6A5M8
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.951
A0A4V6ACJ2
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.951
A0A4U5PTA7
Uncharacterized protein.
  
 0.944
A0A4U5QEI6
Exonuclease 1.
   
 0.928
A0A4U5QKM3
Exonuclease 1.
   
 0.918
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.