STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V6AC64Transcription initiation factor IIB-2; Belongs to the glycosyl hydrolase 17 family. (343 aa)    
Predicted Functional Partners:
A0A4U5NK22
Armadillo repeat-containing protein LFR isoform X2.
    
 0.778
A0A4U5PN96
Actin-related protein 4-like isoform X1; Belongs to the actin family.
    
 0.760
A0A4V6ABG2
Actin-related family protein; Belongs to the actin family.
    
 0.760
A0A4U5NQ55
J domain-containing protein.
    
 0.631
A0A4U5Q8F6
Chromatin structure-remodeling complex protein BSH.
    
 0.631
A0A4U5QVD3
J domain-containing protein.
    
 0.631
A0A4V6A941
J domain-containing protein.
    
 0.631
A0A4U5MHP2
SWIB domain-containing protein.
    
 0.617
A0A4U5NBD0
SWI/SNF complex component SNF12-like.
    
 0.617
A0A4U5Q940
SWIB domain-containing protein.
    
 0.617
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.