STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V6ACC9Zinc finger family protein. (437 aa)    
Predicted Functional Partners:
A0A4U5QRT2
Nuclear pore complex protein NUP205 isoform X2.
   
 0.989
A0A4U5MXC6
Uncharacterized protein.
    
 0.988
A0A4U5QBD8
Nuclear pore complex protein NUP88-like.
    
 0.988
A0A4U5N7Z6
Seh1 family protein; Belongs to the WD repeat SEC13 family.
    
 0.987
A0A4U5NL19
Uncharacterized protein.
    
 0.987
A0A4V6A5R7
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.985
A0A4U5NKJ1
Protein GLE1 isoform X3.
    
 0.982
A0A4U5QUG7
B3 domain-containing protein.
   
 0.979
A0A4V6XWR4
Nuclear pore complex protein NUP62.
   
 0.979
A0A4U5MNF1
Nuclear pore protein.
    
 0.978
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.