STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX9LIM homeobox 9. (397 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.811
LDB2
LIM domain binding 2.
    
 0.808
DBX1
Developing brain homeobox 1.
    
 
 0.641
BSX
Brain specific homeobox.
    
 0.621
FEZF1
FEZ family zinc finger 1.
  
 
 0.607
CBX2
Chromobox 2.
      
 0.602
POU4F3
POU class 4 homeobox 3.
   
 
0.460
HCRT
Hypocretin neuropeptide precursor.
     
 0.438
ENSBBBP00000022325
annotation not available
   
 
 0.438
LMO3
LIM domain only 3.
   
 
0.427
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.