Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF183Ring finger protein 183. (188 aa)    
Predicted Functional Partners:
YTHDC1
YTH domain containing 1.
    
   0.669
RNF144A
Ring finger protein 144A.
    
 0.563
RNF186
Ring finger protein 186.
    
 
 0.549
RNF150
Ring finger protein 150.
      
 0.548
RNF130
Ring finger protein 130.
      
 0.548
TMEM129
Transmembrane protein 129.
      
 0.543
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 0.527
DNER
Delta/notch like EGF repeat containing.
    
 0.523
RNF144B
Ring finger protein 144B.
    
 0.512
ENSBBBP00000025585
annotation not available
   
    0.451
Your Current Organism:
Bison bison
NCBI taxonomy Id: 43346
Other names: B. bison bison, Bison bison bison, Bos bison bison
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