Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAMBI | SMAD2 | ENSBBBP00000003326 | ENSBBBP00000001361 | BMP and activin membrane bound inhibitor. | SMAD family member 2. | 0.615 |
BAMBI | SMAD5 | ENSBBBP00000003326 | ENSBBBP00000011722 | BMP and activin membrane bound inhibitor. | SMAD family member 5. | 0.557 |
BAMBI | SMAD7 | ENSBBBP00000003326 | ENSBBBP00000001325 | BMP and activin membrane bound inhibitor. | SMAD family member 7. | 0.952 |
BAMBI | TGFBR1 | ENSBBBP00000003326 | ENSBBBP00000011250 | BMP and activin membrane bound inhibitor. | Transforming growth factor beta receptor 1. | 0.963 |
BAMBI | TGFBR2 | ENSBBBP00000003326 | ENSBBBP00000009846 | BMP and activin membrane bound inhibitor. | Transforming growth factor beta receptor 2. | 0.600 |
NEDD4L | SMAD2 | ENSBBBP00000024618 | ENSBBBP00000001361 | NEDD4 like E3 ubiquitin protein ligase. | SMAD family member 2. | 0.965 |
NEDD4L | SMAD5 | ENSBBBP00000024618 | ENSBBBP00000011722 | NEDD4 like E3 ubiquitin protein ligase. | SMAD family member 5. | 0.835 |
NEDD4L | SMAD7 | ENSBBBP00000024618 | ENSBBBP00000001325 | NEDD4 like E3 ubiquitin protein ligase. | SMAD family member 7. | 0.937 |
NEDD4L | SMURF1 | ENSBBBP00000024618 | ENSBBBP00000001196 | NEDD4 like E3 ubiquitin protein ligase. | SMAD specific E3 ubiquitin protein ligase 1. | 0.769 |
NEDD4L | SMURF2 | ENSBBBP00000024618 | ENSBBBP00000005925 | NEDD4 like E3 ubiquitin protein ligase. | SMAD specific E3 ubiquitin protein ligase 2. | 0.909 |
RNF111 | SMAD2 | ENSBBBP00000005408 | ENSBBBP00000001361 | Ring finger protein 111. | SMAD family member 2. | 0.550 |
RNF111 | SMAD7 | ENSBBBP00000005408 | ENSBBBP00000001325 | Ring finger protein 111. | SMAD family member 7. | 0.967 |
SMAD2 | BAMBI | ENSBBBP00000001361 | ENSBBBP00000003326 | SMAD family member 2. | BMP and activin membrane bound inhibitor. | 0.615 |
SMAD2 | NEDD4L | ENSBBBP00000001361 | ENSBBBP00000024618 | SMAD family member 2. | NEDD4 like E3 ubiquitin protein ligase. | 0.965 |
SMAD2 | RNF111 | ENSBBBP00000001361 | ENSBBBP00000005408 | SMAD family member 2. | Ring finger protein 111. | 0.550 |
SMAD2 | SMAD5 | ENSBBBP00000001361 | ENSBBBP00000011722 | SMAD family member 2. | SMAD family member 5. | 0.665 |
SMAD2 | SMAD7 | ENSBBBP00000001361 | ENSBBBP00000001325 | SMAD family member 2. | SMAD family member 7. | 0.943 |
SMAD2 | SMURF1 | ENSBBBP00000001361 | ENSBBBP00000001196 | SMAD family member 2. | SMAD specific E3 ubiquitin protein ligase 1. | 0.830 |
SMAD2 | SMURF2 | ENSBBBP00000001361 | ENSBBBP00000005925 | SMAD family member 2. | SMAD specific E3 ubiquitin protein ligase 2. | 0.989 |
SMAD2 | TGFBR1 | ENSBBBP00000001361 | ENSBBBP00000011250 | SMAD family member 2. | Transforming growth factor beta receptor 1. | 0.992 |
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